Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
BBAL3_554RND transporter, HAE1 family; [V] COG0841 Cation/multidrug efflux pump. (1090 aa)    
Predicted Functional Partners:
BBAL3_1812
Efflux transporter, outer membrane factor lipoprotein, NodT family; [MU] COG1538 Outer membrane protein.
 0.989
BBAL3_1106
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.988
BBAL3_375
Efflux transporter, outer membrane factor lipoprotein, NodT family; [MU] COG1538 Outer membrane protein.
 0.942
BBAL3_1055
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.937
BBAL3_798
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.916
BBAL3_2667
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.884
BBAL3_3208
Type I secretion outer membrane protein, TolC family; [MU] COG1538 Outer membrane protein.
 
 0.868
BBAL3_1761
Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.847
BBAL3_122
[MU] COG1538 Outer membrane protein.
 
 0.836
BBAL3_1828
Auxiliary transport protein, MFP family, putative; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
  0.831
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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