STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_581Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (311 aa)    
Predicted Functional Partners:
BBAL3_3223
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.945
BBAL3_650
Hypothetical protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
   
 0.823
BBAL3_1486
Bacterial transferase hexapeptide repeat protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
     
 0.787
BBAL3_3172
[M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
  
 0.567
BBAL3_235
Nucleotidyl transferase family; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 
 0.515
BBAL3_2444
Glycosyl transferase, group 2 family protein; [R] COG1216 Predicted glycosyltransferases.
    
 0.488
BBAL3_1909
Bacterial sugar transferase, putative; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.481
BBAL3_2827
Nucleotide sugar dehydrogenase subfamily; [M] COG1004 Predicted UDP-glucose 6-dehydrogenase.
  
  
 0.451
BBAL3_3057
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
  
 
  0.407
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
    
 0.405
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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