STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_650Hypothetical protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily). (80 aa)    
Predicted Functional Partners:
BBAL3_3223
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase subfamily; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.860
BBAL3_1486
Bacterial transferase hexapeptide repeat protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
     0.843
BBAL3_581
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.823
BBAL3_1950
DegT/DnrJ/EryC1/StrS aminotransferase family; [M] COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.694
BBAL3_3057
Glycosyl transferase, group 1 family protein; [M] COG0438 Glycosyltransferase.
 
    0.582
BBAL3_3172
[M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
  
 0.516
groL
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
     
  0.504
BBAL3_1909
Bacterial sugar transferase, putative; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.497
BBAL3_2902
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.467
BBAL3_1340
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.431
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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