STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_7Antioxidant, AhpC/TSA family; [O] COG1225 Peroxiredoxin. (155 aa)    
Predicted Functional Partners:
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
   0.822
BBAL3_204
Glutamate-ammonia ligase adenylyltransferase family; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal [...]
      0.684
BBAL3_1527
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.654
BBAL3_1794
Homoserine dehydrogenase, NAD binding domain family; [E] COG0460 Homoserine dehydrogenase.
  
 
  0.617
BBAL3_1268
Redoxin family; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
  
 0.592
BBAL3_3340
Redoxin family; [OC] COG0526 Thiol-disulfide isomerase and thioredoxins.
  
  
 0.567
BBAL3_6
M23 peptidase domain protein; [M] COG0739 Membrane proteins related to metalloendopeptidases.
  
  
 0.562
BBAL3_2258
Rhodanese-like domain protein; [P] COG2897 Rhodanese-related sulfurtransferase.
    
 0.553
BBAL3_5
Conserved hypothetical protein; [M] COG1664 Integral membrane protein CcmA involved in cell shape determination.
     
 0.542
BBAL3_2168
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.
    
  0.525
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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