STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_797Putative addiction module antidote protein, CC2985 family; [K] COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain. (84 aa)    
Predicted Functional Partners:
BBAL3_3092
[R] COG3668 Plasmid stabilization system protein.
 
 
 0.987
BBAL3_1775
[R] COG3668 Plasmid stabilization system protein.
 
 
 0.840
BBAL3_1062
[R] COG3668 Plasmid stabilization system protein.
  
 
 0.783
BBAL3_127
[S] COG1801 Uncharacterized conserved protein.
       0.773
cobB
[K] COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.599
BBAL3_2150
Alcohol dehydrogenase GroES-like domain family; [R] COG1064 Zn-dependent alcohol dehydrogenases.
       0.547
BBAL3_3356
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
 
 0.487
BBAL3_3081
Histidine utilization repressor; [K] COG2188 Transcriptional regulators.
  
    0.442
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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