STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_84Hypothetical protein. (251 aa)    
Predicted Functional Partners:
BBAL3_125
OmpA family protein; [M] COG3637 Opacity protein and related surface antigens.
  
 0.834
BBAL3_1258
OmpA family protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.834
BBAL3_1639
FtsK/SpoIIIE family, putative; [D] COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.760
BBAL3_2729
Glycosyl hydrolase family 10; [G] COG3693 Beta-1,4-xylanase.
     
 0.730
BBAL3_1648
Hypothetical protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
     
  0.700
BBAL3_765
[S] COG3422 Uncharacterized conserved protein.
    
   0.687
BBAL3_1307
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
  0.674
BBAL3_1932
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
  0.674
BBAL3_1994
[H] COG4206 Outer membrane cobalamin receptor protein.
    
  0.674
BBAL3_3265
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
    
  0.674
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.