Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BBAL3_855Conserved domain protein. (172 aa)    
Predicted Functional Partners:
BBAL3_1336
[L] COG2925 Exonuclease I.
 
     0.859
BBAL3_820
Helix-turn-helix domain protein.
       0.813
BBAL3_3258
UvrD/REP helicase domain protein; [L] COG0358 DNA primase (bacterial type); Belongs to the helicase family. UvrD subfamily.
    
  0.736
ruvA
Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.
     
  0.733
BBAL3_499
UvrD/REP helicase domain protein; [L] COG0210 Superfamily I DNA and RNA helicases.
     
  0.733
BBAL3_2465
Hypothetical protein.
       0.503
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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