STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BBAL3_899[S] COG1729 Uncharacterized protein conserved in bacteria. (282 aa)    
Predicted Functional Partners:
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.927
tilS
PP-loop family; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.
 
     0.861
BBAL3_622
Hypothetical protein; [O] COG0760 Parvulin-like peptidyl-prolyl isomerase.
 
   0.832
ftsH
ATP-dependent metallopeptidase HflB subfamily; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.818
pal
Peptidoglycan-associated lipoprotein, putative; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  
 0.786
BBAL3_156
Hypothetical protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.773
BBAL3_3013
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.773
BBAL3_612
[S] COG2911 Uncharacterized protein conserved in bacteria.
 
   
 0.773
BBAL3_1784
Hypothetical protein; [C] COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases).
  
     0.770
BBAL3_1461
Hypothetical protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.769
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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