STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBAL3_987Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; overlaps another CDS with the same product name. (130 aa)    
Predicted Functional Partners:
BBAL3_2286
Thioesterase family protein; [Q] COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; overlaps another CDS with the same product name.
 
  
 0.963
BBAL3_604
Hypothetical protein; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
       0.559
plsX
Fatty acid/phospholipid synthesis protein PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.483
BBAL3_2603
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.466
BBAL3_1109
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain family; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
 
 0.445
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
     0.442
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.433
BBAL3_1509
FeS assembly SUF system protein; [R] COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
  
 
 0.412
BBAL3_2990
[J] COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
   
   0.400
Your Current Organism:
Brevundimonas sp. BAL3
NCBI taxonomy Id: 391600
Other names: B. sp. BAL3
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