STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69547.1Hypothetical protein; COG0531 Amino acid transporters. (421 aa)    
Predicted Functional Partners:
EDP69544.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
       0.623
EDP69545.1
Hypothetical protein.
       0.623
EDP69546.1
Hypothetical protein; COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
       0.623
EDP69543.1
Hypothetical protein; COG1091 dTDP-4-dehydrorhamnose reductase.
       0.547
EDP69548.1
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
       0.415
EDP69549.1
COG0438 Glycosyltransferase.
       0.410
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.