STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69559.1Hypothetical protein; COG0151 Phosphoribosylamine-glycine ligase. (305 aa)    
Predicted Functional Partners:
EDP69558.1
Hypothetical protein.
 
     0.839
EDP71180.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.772
EDP72636.1
Hypothetical protein.
  
     0.768
EDP69827.1
Hypothetical protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
  
     0.762
EDP71233.1
Hypothetical protein; COG0206 Cell division GTPase.
  
     0.760
EDP71105.1
Hypothetical protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
 
     0.759
EDP69905.1
lysM domain protein; COG0313 Predicted methyltransferases.
  
     0.750
EDP70700.1
Hypothetical protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
  
     0.749
EDP69443.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
  
     0.746
EDP70626.1
COG2911 Uncharacterized protein conserved in bacteria.
  
     0.744
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.