STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69561.1Hypothetical protein; COG0035 Uracil phosphoribosyltransferase. (202 aa)    
Predicted Functional Partners:
EDP69562.1
Heptosyltransferase; COG0859 ADP-heptose:LPS heptosyltransferase.
 
    0.904
EDP69560.1
Uracil phosphoribosyltransferase.
       0.555
EDP71118.1
Hypothetical protein.
  
     0.534
EDP69708.1
Hypothetical protein; COG0686 Alanine dehydrogenase.
  
     0.413
EDP71489.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.400
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.