STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71110.1COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family. (289 aa)    
Predicted Functional Partners:
EDP70806.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
 
  0.708
EDP70807.1
Purine nucleoside phosphorylase II.
  
  
  0.679
EDP72770.1
Pyruvate flavodoxin dehydrogenase.
    
 0.668
EDP71111.1
Hypothetical protein; COG0629 Single-stranded DNA-binding protein.
       0.659
EDP70118.1
Amino acid adenylation; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
    
  0.636
EDP70119.1
COG1020 Non-ribosomal peptide synthetase modules and related proteins.
     
 0.615
EDP72580.1
Bifunctional protein: riboflavin kinase; FAD synthetase; Belongs to the ribF family.
    
  0.599
EDP71326.1
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
  0.597
pyrD
Aconitate hydratase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
  0.590
EDP71141.1
COG3508 Homogentisate 1,2-dioxygenase.
 
     0.581
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.