STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71205.1COG0531 Amino acid transporters. (366 aa)    
Predicted Functional Partners:
EDP71204.1
COG0531 Amino acid transporters.
     0.993
EDP71206.1
Hypothetical protein; COG1834 N-Dimethylarginine dimethylaminohydrolase.
 
  
 0.870
EDP71281.1
Putative alpha-amylase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
   
 0.799
EDP71285.1
Alpha amylase, catalytic region; COG0366 Glycosidases.
   
 0.799
EDP71286.1
Alpha-amylase G-6 precursor; COG0366 Glycosidases.
   
 0.799
EDP71202.1
Hypothetical protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
     0.703
EDP71203.1
Hypothetical protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
     0.667
EDP71881.1
COG0169 Shikimate 5-dehydrogenase.
   
 0.596
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
   0.577
EDP72143.1
Probable cell surface protein (LPXTG motif); COG4886 Leucine-rich repeat (LRR) protein.
    
 0.563
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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