STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71215.1COG3096 Uncharacterized protein involved in chromosome partitioning. (37 aa)    
Predicted Functional Partners:
EDP71213.1
COG0228 Ribosomal protein S16.
       0.773
EDP71214.1
Hypothetical protein.
       0.773
EDP71212.1
Hypothetical protein.
       0.620
EDP71216.1
COG2176 DNA polymerase III, alpha subunit (gram-positive type).
       0.486
EDP71217.1
COG0587 DNA polymerase III, alpha subunit.
       0.486
EDP71211.1
Hypothetical protein.
       0.447
EDP71218.1
D-alanyl-D-alanine carboxypeptidase; COG1680 Beta-lactamase class C and other penicillin binding proteins.
       0.426
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.