STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71270.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (384 aa)    
Predicted Functional Partners:
EDP71268.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
       0.543
EDP71269.1
Putative antibiotic resistance-related regulatory protein; COG3682 Predicted transcriptional regulator.
       0.543
EDP71271.1
Peptidase, family M20/M25/M40 and dimerization domain; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.532
EDP71272.1
Peptidase, family M20/M25/M40 and dimerization domain; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.
       0.532
EDP72597.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
     0.493
EDP71070.1
COG0304 3-oxoacyl-(acyl-carrier-protein) synthase.
  
     0.465
EDP70943.1
Hypothetical protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
  
     0.400
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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