STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71294.1COG2081 Predicted flavoproteins. (418 aa)    
Predicted Functional Partners:
EDP71295.1
COG3797 Uncharacterized protein conserved in bacteria.
       0.791
EDP71296.1
Hypothetical protein; COG3407 Mevalonate pyrophosphate decarboxylase.
       0.773
EDP71297.1
COG1577 Mevalonate kinase.
       0.658
EDP71293.1
Hypothetical protein; COG2319 FOG: WD40 repeat.
       0.572
EDP70485.1
COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family.
  
    0.444
EDP71298.1
4-hydroxybenzoate-octaprenyltransferase; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
       0.429
EDP71299.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; COG0388 Predicted amidohydrolase.
       0.429
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.