STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71467.1Oxidoreductase. (712 aa)    
Predicted Functional Partners:
EDP72770.1
Pyruvate flavodoxin dehydrogenase.
    
 0.930
EDP71470.1
COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 
 0.929
EDP71468.1
Hypothetical protein; COG0213 Thymidine phosphorylase.
 
     0.878
EDP72259.1
Phenylacetic acid degradation protein paaN; COG1012 NAD-dependent aldehyde dehydrogenases.
  
 0.878
EDP71466.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
  
 0.873
EDP69563.1
Phenylacetic acid degradation protein E,flavodoxin reductase.
  
 
 0.841
EDP72271.1
Phenylacetic acid degradation protein E,flavodoxin reductase; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.841
EDP70789.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
  
 
 0.838
EDP71460.1
COG0367 Asparagine synthase (glutamine-hydrolyzing).
 
     0.830
EDP71357.1
Gluconokinase and phosphogluconate dehydrogenase (decarboxylating) fusion; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 0.816
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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