STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71587.1Hypothetical protein. (123 aa)    
Predicted Functional Partners:
EDP71586.1
Hypothetical protein.
 
     0.891
EDP71849.1
COG2032 Cu/Zn superoxide dismutase.
   
 0.865
EDP70434.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 
 0.713
EDP70253.1
Cu(I)-translocating P-type ATPase; COG2217 Cation transport ATPase.
  
 
 0.704
EDP71588.1
Hypothetical protein.
       0.512
rplN
50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.410
EDP72328.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.410
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.