STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71613.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
EDP72441.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
     0.712
EDP72440.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
     0.669
EDP72458.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
 
     0.664
EDP71190.1
Hypothetical protein; COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase.
  
     0.593
EDP71614.1
Hypothetical protein.
       0.570
EDP72614.1
Hypothetical protein; COG0016 Phenylalanyl-tRNA synthetase alpha subunit.
  
     0.531
EDP71500.1
COG3239 Fatty acid desaturase.
  
     0.487
EDP72602.1
Hypothetical protein; COG0158 Fructose-1,6-bisphosphatase.
  
     0.475
EDP70057.1
Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
     0.457
EDP71615.1
Hypothetical protein.
       0.439
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.