STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71636.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
EDP71637.1
Hypothetical protein; COG0294 Dihydropteroate synthase and related enzymes.
 
     0.896
EDP72783.1
Hypothetical protein; COG2971 Predicted N-acetylglucosamine kinase.
  
     0.718
fmt
methionyl-tRNA formyltransferase; COG3911 Predicted ATPase.
  
     0.626
EDP70629.1
Hypothetical protein.
  
     0.613
EDP71635.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.587
EDP70592.1
Chloromuconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily.
  
     0.572
truA
tRNA pseudouridine synthase A; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.551
EDP71634.1
Hypothetical protein.
       0.546
dacA
Putative transmembrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.525
EDP72766.1
COG0333 Ribosomal protein L32.
  
     0.523
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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