STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71726.1Putative transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (794 aa)    
Predicted Functional Partners:
EDP71721.1
Putative ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.916
EDP71720.1
Efflux transporter, RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.903
EDP71734.1
ABC transporter related protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
   0.892
EDP71718.1
Sensory box sensor histidine kinase; COG0642 Signal transduction histidine kinase.
 
     0.813
EDP71735.1
COG1538 Outer membrane protein.
 
   0.780
EDP71725.1
Putative transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
   
0.765
EDP71727.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.763
EDP71724.1
Putative transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.726
EDP71728.1
Putative FtsX-related transmembrane transport protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.696
EDP71723.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
    
0.664
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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