STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69675.1Glycosyl transferase, group 1; COG0438 Glycosyltransferase. (385 aa)    
Predicted Functional Partners:
EDP69674.1
Hypothetical protein; COG0381 UDP-N-acetylglucosamine 2-epimerase.
 
  
  0.944
EDP69676.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
     0.941
EDP69679.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
     0.941
EDP69677.1
Glycosyl transferase, group 1 family protein.
 
     0.939
EDP69678.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
 
  0.897
EDP69673.1
UDP-N-acetylglucosamine 2-epimerase.
 
    0.839
EDP69672.1
N-acetylneuraminic acid synthetase; COG2089 Sialic acid synthase.
  
    0.787
EDP69680.1
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.784
EDP69668.1
Mannosyltransferase; COG0438 Glycosyltransferase.
 
     0.717
EDP69671.1
Hypothetical protein; COG2089 Sialic acid synthase.
       0.598
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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