STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69680.1COG2148 Sugar transferases involved in lipopolysaccharide synthesis. (464 aa)    
Predicted Functional Partners:
EDP69657.1
Tyrosine-protein kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.997
EDP71473.1
Tyrosine-protein kinase ptk; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.995
EDP69732.1
Tyrosine-protein kinase ptk; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.994
EDP69664.1
Glycosyl transferase, family 2; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.974
EDP69656.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.950
EDP69678.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
  
 0.936
EDP71472.1
Polysaccharide export protein, BexD/CtrA/VexA family; COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.926
EDP72180.1
COG0836 Mannose-1-phosphate guanylyltransferase.
  
 
 0.921
EDP69731.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
 
 0.915
EDP69553.1
beta-1,4-N-acetyl-mannosaminyltransferase, putative; COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
   
 0.905
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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