STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70283.1Signal peptidase I; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component; Belongs to the peptidase S26 family. (540 aa)    
Predicted Functional Partners:
EDP70280.1
COG3021 Uncharacterized protein conserved in bacteria.
       0.793
EDP70279.1
Hypothetical protein.
       0.786
EDP70282.1
Cell division cycle protein 48-related protein; COG0457 FOG: TPR repeat; Belongs to the AAA ATPase family.
  
    0.786
EDP70281.1
Hypothetical protein; COG0457 FOG: TPR repeat.
       0.773
EDP71876.1
Hypothetical protein; COG0104 Adenylosuccinate synthase.
  
     0.765
EDP70285.1
Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components.
 
     0.762
EDP70284.1
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate.
  
    0.633
EDP70286.1
Chromosome partitioning protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
       0.626
EDP70287.1
Regulator protein; COG1192 ATPases involved in chromosome partitioning.
       0.626
EDP72413.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
  
 0.606
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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