STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70331.1Hypothetical protein. (343 aa)    
Predicted Functional Partners:
EDP70332.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.723
EDP70333.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.723
EDP72547.1
Hypothetical protein.
  
     0.623
EDP70334.1
COG1252 NADH dehydrogenase, FAD-containing subunit.
       0.499
EDP72550.1
Hypothetical protein.
  
     0.468
EDP71733.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.448
EDP70662.1
Hypothetical protein.
  
     0.407
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.