STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70437.1Hypothetical protein; COG3467 Predicted flavin-nucleotide-binding protein. (151 aa)    
Predicted Functional Partners:
EDP70438.1
Hypothetical protein.
       0.732
EDP70435.1
COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.711
EDP70439.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
       0.707
EDP70724.1
Hypothetical protein; COG0438 Glycosyltransferase.
  
     0.703
EDP70431.1
COG0845 Membrane-fusion protein.
 
     0.661
EDP70434.1
Heavy metal translocating P-type ATPase; COG2217 Cation transport ATPase.
 
    0.635
EDP70432.1
COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
 
     0.628
EDP70427.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
     0.618
EDP72709.1
Hypothetical protein.
  
     0.585
EDP71075.1
Hypothetical protein; COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis.
 
    0.578
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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