STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70447.1CHU large protein; uncharacterized. (330 aa)    
Predicted Functional Partners:
EDP70455.1
Leucyl-tRNA synthetase class Ia.
 
     0.829
EDP72829.1
Hypothetical protein.
  
     0.772
EDP70446.1
Poly(beta-D-mannuronate) lyase.
       0.752
EDP70448.1
Poly(beta-D-mannuronate) lyase.
 
     0.723
EDP71890.1
Hypothetical protein; COG0603 Predicted PP-loop superfamily ATPase.
  
     0.721
EDP70450.1
Hypothetical protein; COG1052 Lactate dehydrogenase and related dehydrogenases.
 
     0.680
EDP70099.1
Hypothetical protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog.
  
     0.656
EDP70449.1
Alginate lyase.
 
     0.652
EDP71891.1
Hypothetical protein; COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC.
  
     0.615
EDP70138.1
Endonuclease/exonuclease/phosphatase family protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.535
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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