Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDP70685.1 | EDP70686.1 | FBALC1_07998 | FBALC1_08003 | Hypothetical protein; COG0012 Predicted GTPase, probable translation factor. | Beta-lactamase. | 0.461 |
EDP70686.1 | EDP70685.1 | FBALC1_08003 | FBALC1_07998 | Beta-lactamase. | Hypothetical protein; COG0012 Predicted GTPase, probable translation factor. | 0.461 |
EDP70686.1 | EDP70792.1 | FBALC1_08003 | FBALC1_08533 | Beta-lactamase. | Amidohydrolase family protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase. | 0.604 |
EDP70686.1 | EDP71013.1 | FBALC1_08003 | FBALC1_00977 | Beta-lactamase. | COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.767 |
EDP70686.1 | guaA-2 | FBALC1_08003 | FBALC1_06493 | Beta-lactamase. | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.534 |
EDP70792.1 | EDP70686.1 | FBALC1_08533 | FBALC1_08003 | Amidohydrolase family protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase. | Beta-lactamase. | 0.604 |
EDP71013.1 | EDP70686.1 | FBALC1_00977 | FBALC1_08003 | COG1680 Beta-lactamase class C and other penicillin binding proteins. | Beta-lactamase. | 0.767 |
EDP71013.1 | guaA-2 | FBALC1_00977 | FBALC1_06493 | COG1680 Beta-lactamase class C and other penicillin binding proteins. | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.534 |
guaA-2 | EDP70686.1 | FBALC1_06493 | FBALC1_08003 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Beta-lactamase. | 0.534 |
guaA-2 | EDP71013.1 | FBALC1_06493 | FBALC1_00977 | GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.534 |