STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70719.1Hypothetical Membrane Spanning Protein. (497 aa)    
Predicted Functional Partners:
EDP70718.1
Membrane-flanked domain.
 
  
 0.983
EDP70716.1
Hypothetical protein; COG0247 Fe-S oxidoreductase.
       0.741
EDP70717.1
Fe-S oxidoreductase, possible dehydrogenase subunit; COG0247 Fe-S oxidoreductase.
       0.741
EDP70715.1
Possible oxidoreductase, Fe-S subunit.
       0.731
EDP70714.1
Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
       0.706
EDP70720.1
COG3428 Predicted membrane protein.
       0.658
EDP70721.1
Putative phosphoserine phosphatase; COG3830 ACT domain-containing protein.
       0.560
EDP70713.1
COG0860 N-acetylmuramoyl-L-alanine amidase.
       0.553
EDP70773.1
Hypothetical protein.
  
     0.534
EDP70820.1
Hypothetical protein.
 
     0.516
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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