STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70722.1B-glycosidase, glycoside hydrolase family 3 protein; COG1472 Beta-glucosidase-related glycosidases. (972 aa)    
Predicted Functional Partners:
EDP71796.1
COG3876 Uncharacterized protein conserved in bacteria.
 
 0.948
EDP72478.1
beta-N-acetylhexosaminidase; COG3525 N-acetyl-beta-hexosaminidase.
    
 0.812
EDP72785.1
Riboflavin synthase subunit alpha.
    
 0.812
EDP72207.1
Hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
 0.804
murQ-2
Glucokinase regulatory protein, sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
 0.658
rpmE2
50S ribosomal protein L31 type B; COG2356 Endonuclease I.
     
 0.643
EDP70052.1
COG2340 Uncharacterized protein with SCP/PR1 domains.
  
 
  0.608
EDP72504.1
Hypothetical protein.
  
 
  0.608
guaA-2
GMP synthetase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.582
EDP70721.1
Putative phosphoserine phosphatase; COG3830 ACT domain-containing protein.
       0.555
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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