STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70742.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
EDP70741.1
Hypothetical protein.
       0.727
EDP70917.1
Hypothetical protein; COG1607 Acyl-CoA hydrolase.
    
 
 0.705
EDP70740.1
Hypothetical protein.
       0.619
EDP69533.1
Hypothetical protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
    
 0.580
EDP71430.1
COG0768 Cell division protein FtsI/penicillin-binding protein 2.
    
 0.580
EDP71575.1
Hypothetical protein.
    
 0.580
EDP71989.1
COG2815 Uncharacterized protein conserved in bacteria.
   
 
 0.536
EDP72844.1
Hypothetical protein; COG0625 Glutathione S-transferase.
     
 0.510
EDP70535.1
COG1876 D-alanyl-D-alanine carboxypeptidase.
     
 0.501
EDP70773.1
Hypothetical protein.
 
     0.437
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.