STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70793.1COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (441 aa)    
Predicted Functional Partners:
EDP70238.1
COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 
  0.607
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
       0.589
EDP70795.1
Thiosulfate sulfurtransferase SseA, putative; COG2897 Rhodanese-related sulfurtransferase.
       0.579
EDP70796.1
Hypothetical protein.
       0.579
EDP70798.1
COG3930 Uncharacterized protein conserved in bacteria.
       0.577
EDP70797.1
Hypothetical protein; COG0612 Predicted Zn-dependent peptidases.
       0.572
EDP70792.1
Amidohydrolase family protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase.
 
     0.533
EDP72453.1
Bifunctional protein: malate dehydrogenase; phosphotransacetylase.
  
  
 0.478
EDP71371.1
COG0067 Glutamate synthase domain 1.
     
 0.459
EDP70791.1
Hypothetical protein; COG2866 Predicted carboxypeptidase.
       0.446
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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