STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70796.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
EDP70795.1
Thiosulfate sulfurtransferase SseA, putative; COG2897 Rhodanese-related sulfurtransferase.
      0.957
EDP70797.1
Hypothetical protein; COG0612 Predicted Zn-dependent peptidases.
       0.773
EDP70798.1
COG3930 Uncharacterized protein conserved in bacteria.
       0.773
gshB
COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); Belongs to the prokaryotic GSH synthase family.
       0.759
EDP71648.1
Metallo-beta-lactamase superfamily protein; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
 0.748
EDP70789.1
Probable oxidoreductase; COG0277 FAD/FMN-containing dehydrogenases.
    
 0.733
EDP72570.1
COG0155 Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.681
EDP70793.1
COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.579
EDP70090.1
Cysteine desulfurase.
   
 0.573
EDP71386.1
COG0527 Aspartokinases.
     
 0.521
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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