STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70814.1Hypothetical protein; COG2374 Predicted extracellular nuclease. (138 aa)    
Predicted Functional Partners:
EDP70063.1
COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.721
EDP72606.1
Hypothetical protein.
   
  
 0.721
EDP70825.1
CHU large protein; COG3291 FOG: PKD repeat.
  
     0.583
EDP69788.1
Hypothetical protein.
  
     0.532
EDP72732.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
     0.467
EDP70824.1
Hypothetical protein; COG2202 FOG: PAS/PAC domain.
  
     0.402
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.