STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69715.1Wlac protein; COG0438 Glycosyltransferase. (363 aa)    
Predicted Functional Partners:
EDP69714.1
Putative O-antigen flippase; COG0534 Na+-driven multidrug efflux pump.
 
    0.879
EDP71890.1
Hypothetical protein; COG0603 Predicted PP-loop superfamily ATPase.
 
 
    0.869
EDP69713.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    0.853
EDP69716.1
Secreted polysaccharide polymerase; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
 
  0.789
EDP69717.1
COG4289 Uncharacterized protein conserved in bacteria.
       0.773
EDP69723.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
     0.716
EDP69720.1
Serine O-acetyltransferase.
 
    0.678
EDP69721.1
Glycosyltransferase; COG1045 Serine acetyltransferase.
     0.637
EDP69726.1
Glycosyl transferase, group 1; COG0438 Glycosyltransferase.
 
     0.577
EDP69712.1
COG5492 Bacterial surface proteins containing Ig-like domains.
       0.572
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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