STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69919.1Hypothetical protein. (271 aa)    
Predicted Functional Partners:
EDP69918.1
Outer membrane protein.
 
     0.947
EDP69917.1
COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
       0.512
EDP69920.1
Hypothetical protein.
       0.457
EDP70626.1
COG2911 Uncharacterized protein conserved in bacteria.
  
     0.441
EDP72013.1
Hypothetical protein; COG0442 Prolyl-tRNA synthetase.
  
     0.439
EDP69617.1
Hypothetical protein; COG3324 Predicted enzyme related to lactoylglutathione lyase.
  
     0.428
EDP71586.1
Hypothetical protein.
  
     0.419
EDP70593.1
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
     0.419
EDP72423.1
COG4775 Outer membrane protein/protective antigen OMA87.
  
     0.418
EDP69858.1
COG0691 tmRNA-binding protein.
  
     0.411
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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