STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69922.1COG4775 Outer membrane protein/protective antigen OMA87. (419 aa)    
Predicted Functional Partners:
EDP71312.1
COG2849 Uncharacterized protein conserved in bacteria.
  
     0.758
EDP69884.1
TPR repeat protein; COG4105 DNA uptake lipoprotein.
  
 
 0.752
rplS
50S ribosomal protein L19; COG1680 Beta-lactamase class C and other penicillin binding proteins.
       0.651
EDP70828.1
Hypothetical protein.
  
 
 0.648
EDP72536.1
Hypothetical protein; COG5295 Autotransporter adhesin.
  
 
 0.648
EDP69920.1
Hypothetical protein.
 
     0.646
EDP71034.1
Hypothetical protein.
  
     0.629
EDP70989.1
Membrane-associated zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1.
  
  
 0.573
EDP69921.1
Hypothetical protein; COG4771 Outer membrane receptor for ferrienterochelin and colicins.
       0.566
murQ-2
Glucokinase regulatory protein, sugar phosphate isomerase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.538
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.