rpmI protein (Flavobacteriales bacterium ALC1)

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second shell of interactors

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

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Score

rpmI

COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (65 aa)

Predicted Functional Partners:

rplU

0.994

rplT-2

0.993

rpsR

0.987

rpmF-2

0.987

rpsP

0.986

rpsF

0.986

rpsO

0.985

rplK

0.985

rplJ

0.985

rpmB

0.985

Your Current Organism:

Flavobacteriales bacterium ALC1

NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplJ	rplK	FBALC1_04982	FBALC1_04972	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.997
rplJ	rplT-2	FBALC1_04982	FBALC1_10367	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.986
rplJ	rplU	FBALC1_04982	FBALC1_16217	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Hypothetical protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rplJ	rpmB	FBALC1_04982	FBALC1_06348	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Uridine kinase; COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.981
rplJ	rpmF-2	FBALC1_04982	FBALC1_16727	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.982
rplJ	rpmI	FBALC1_04982	FBALC1_10362	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.985
rplJ	rpsF	FBALC1_04982	FBALC1_06593	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.988
rplJ	rpsO	FBALC1_04982	FBALC1_03332	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplJ	rpsP	FBALC1_04982	FBALC1_01962	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.985
rplJ	rpsR	FBALC1_04982	FBALC1_06598	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.986
rplK	rplJ	FBALC1_04972	FBALC1_04982	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.997
rplK	rplT-2	FBALC1_04972	FBALC1_10367	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.985
rplK	rplU	FBALC1_04972	FBALC1_16217	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Hypothetical protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.995
rplK	rpmB	FBALC1_04972	FBALC1_06348	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Uridine kinase; COG0227 Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.984
rplK	rpmF-2	FBALC1_04972	FBALC1_16727	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.984
rplK	rpmI	FBALC1_04972	FBALC1_10362	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.985
rplK	rpsF	FBALC1_04972	FBALC1_06593	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.989
rplK	rpsO	FBALC1_04972	FBALC1_03332	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.987
rplK	rpsP	FBALC1_04972	FBALC1_01962	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.986
rplK	rpsR	FBALC1_04972	FBALC1_06598	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.984