STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP69953.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (184 aa)    
Predicted Functional Partners:
EDP69950.1
COG1233 Phytoene dehydrogenase and related proteins.
 
  
  0.683
EDP69952.1
Beta-carotene hydroxylase; COG1562 Phytoene/squalene synthetase.
 
     0.630
EDP70487.1
Hypothetical protein.
      0.614
EDP69951.1
Phytoene synthase.
 
   
 0.610
EDP69949.1
COG1233 Phytoene dehydrogenase and related proteins.
 
  
  0.592
EDP70740.1
Hypothetical protein.
 
     0.400
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.