STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70113.1Possible gliding motility protein, possible ABC-related protein; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component. (555 aa)    
Predicted Functional Partners:
EDP70111.1
ABC transporter permease; gliding motility-associated protein.
  
 0.995
EDP72313.1
ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein.
 
  
 0.797
EDP71132.1
Possible gliding motility-related protein.
  
   
 0.795
EDP72288.1
Gliding motility protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
   
 0.787
EDP72194.1
Possible gliding motility-related protein; possible serine kinase.
  
   
 0.775
EDP70112.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
       0.773
EDP70926.1
Putative gliding motility protein; COG1774 Uncharacterized homolog of PSP1.
  
   
 0.764
EDP71511.1
Hypothetical protein; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.
  
     0.650
EDP70005.1
Hypothetical protein; COG0069 Glutamate synthase domain 2.
  
     0.618
EDP71608.1
Hypothetical protein.
  
   
 0.605
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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