STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70177.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
EDP70175.1
COG1131 ABC-type multidrug transport system, ATPase component.
 
   0.968
EDP70176.1
Hypothetical protein.
 
    
0.855
EDP70178.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
 
     0.802
folE-2
GTP cyclohydrolase I.
       0.768
EDP70180.1
Hypothetical protein.
       0.768
EDP70174.1
Ferric uptake regulator, FUR family protein; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
 
     0.689
EDP71842.1
Hypothetical protein.
  
 
 0.616
EDP71909.1
Hypothetical protein.
  
     0.599
EDP70181.1
Hypothetical protein; COG0302 GTP cyclohydrolase I.
       0.586
EDP71841.1
Hypothetical protein; COG3420 Nitrous oxidase accessory protein.
  
 
 0.575
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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