STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70198.1Two-component system sensor histidine kinase/response; COG0642 Signal transduction histidine kinase. (1315 aa)    
Predicted Functional Partners:
EDP71248.1
COG0642 Signal transduction histidine kinase.
0.999
EDP71559.1
COG0642 Signal transduction histidine kinase.
 
0.998
EDP70426.1
Sensor histidine kinase.
 
0.998
EDP71352.1
Two-component system sensor histidine kinase/response; COG0642 Signal transduction histidine kinase.
 
0.997
EDP71485.1
Two-component hybrid sensor and regulator.
0.997
EDP71926.1
Two-component system sensor histidine kinase/response regulator, hybrid ('one-component system').
 
0.997
EDP71932.1
Two-component system sensor histidine kinase/response.
 
0.997
EDP72826.1
Sensor histidine kinase/response regulator.
 
0.997
EDP70106.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
 
0.980
EDP71246.1
Response regulator receiver domain protein (CheY-like).
 
0.955
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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