STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP70247.1Leucine-rich protein; COG1100 GTPase SAR1 and related small G proteins. (764 aa)    
Predicted Functional Partners:
EDP72774.1
Putative adenylate/guanylate cyclase; COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
   
 0.961
EDP72143.1
Probable cell surface protein (LPXTG motif); COG4886 Leucine-rich repeat (LRR) protein.
    
 0.953
EDP69930.1
Hypothetical protein.
   
 0.951
EDP70248.1
COG4886 Leucine-rich repeat (LRR) protein.
     0.924
EDP69478.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
  
 0.920
EDP71528.1
COG0666 FOG: Ankyrin repeat.
  
 0.878
EDP70856.1
COG0666 FOG: Ankyrin repeat.
  
 0.878
EDP70872.1
Hypothetical protein; COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.
  
 0.878
EDP71701.1
Possible cardiolipin synthase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
   
 0.870
EDP71055.1
Hypothetical protein; COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
    
 0.843
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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