STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71824.1COG2010 Cytochrome c, mono- and diheme variants. (298 aa)    
Predicted Functional Partners:
EDP70255.1
COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
EDP71822.1
Cytochrome c oxidase, cbb3-type.
 
 0.999
EDP71825.1
Probable ferredoxin.
  
 0.971
EDP71826.1
Hypothetical protein; COG0348 Polyferredoxin.
 
 
 0.963
EDP71823.1
Hypothetical protein; COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  
  0.949
EDP71827.1
Hypothetical protein.
 
     0.899
EDP72441.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
  0.861
EDP72442.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
  0.861
EDP72458.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
  
 0.840
EDP72457.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.839
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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