STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP71923.1Hypothetical protein. (1630 aa)    
Predicted Functional Partners:
EDP69538.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
  
     0.760
EDP72137.1
COG0457 FOG: TPR repeat.
  
     0.756
EDP69494.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
   0.755
EDP71655.1
COG2356 Endonuclease I.
  
     0.724
EDP72854.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
   0.714
EDP72746.1
CHU large protein; uncharacterized.
  
     0.664
EDP72321.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.612
EDP71921.1
Hypothetical protein.
     0.609
EDP72051.1
Hypothetical protein; COG0541 Signal recognition particle GTPase.
  
     0.592
EDP69943.1
Hypothetical protein; COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1.
  
     0.582
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.