STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72181.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
EDP72179.1
COG1808 Predicted membrane protein.
       0.793
EDP72180.1
COG0836 Mannose-1-phosphate guanylyltransferase.
       0.793
EDP72182.1
COG3091 Uncharacterized protein conserved in bacteria.
       0.762
EDP72185.1
Hypothetical protein.
 
     0.683
bshC
COG4365 Uncharacterized protein conserved in bacteria; Belongs to the BshC family.
  
     0.665
EDP70211.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.658
EDP72183.1
HAD-superfamily hydrolase subfamily IA, variant 3; COG0637 Predicted phosphatase/phosphohexomutase.
       0.658
EDP70700.1
Hypothetical protein; COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I.
  
     0.647
EDP72184.1
Outer membrane protein, peptidoglycan-associated lipoprotein; COG0457 FOG: TPR repeat.
       0.617
EDP72186.1
COG4775 Outer membrane protein/protective antigen OMA87.
       0.617
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.