STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72434.1ABC transporter ATP-binding protein. (233 aa)    
Predicted Functional Partners:
EDP72432.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   0.996
EDP72433.1
ABC transporter, permease protein, putative; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   0.996
EDP71581.1
Hypothetical protein.
   0.985
EDP71582.1
Hypothetical protein.
   0.985
rplI
50S ribosomal protein L9; COG0577 ABC-type antimicrobial peptide transport system, permease component.
   0.984
EDP72431.1
Methyl-accepting chemotaxis sensory transducer; COG0845 Membrane-fusion protein.
 
   0.953
EDP71630.1
ABC transporter, ATP-binding/membrane-spanning protein.
 
     
0.899
EDP70223.1
ABC transporter, ATP-binding protein, MsbA family; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
    
0.899
EDP71725.1
Putative transporter permease protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.884
EDP71224.1
COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
 0.879
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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