STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72441.1COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. (333 aa)    
Predicted Functional Partners:
EDP72457.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
 0.996
EDP72458.1
Heme/copper-type cytochrome/quinol oxidase, subunit 2.
 
 0.996
ctaB
Polyprenyltransferase (cytochrome oxidase assembly factor); Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
 
 0.990
EDP72442.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
  
  0.964
atpB
ATP synthase, subunit A (H(+)-transporting two-sector ATPase); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
 
 0.955
EDP72440.1
Hypothetical protein; COG0395 ABC-type sugar transport system, permease component.
 
  
  0.948
EDP71823.1
Hypothetical protein; COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  0.892
EDP71824.1
COG2010 Cytochrome c, mono- and diheme variants.
  
  0.861
EDP71999.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
  
 
   0.800
EDP72436.1
YozB; COG2322 Predicted membrane protein.
 
     0.790
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.