STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP72555.1Hypothetical protein; COG0457 FOG: TPR repeat. (187 aa)    
Predicted Functional Partners:
EDP69650.1
COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase).
  
     0.769
EDP71179.1
COG1587 Uroporphyrinogen-III synthase.
  
     0.711
EDP71601.1
Hypothetical protein.
  
     0.675
EDP71884.1
Hypothetical protein; COG1694 Predicted pyrophosphatase.
  
     0.658
EDP72226.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.652
EDP70574.1
COG4485 Predicted membrane protein.
  
     0.643
EDP71808.1
2-dehydro-3-deoxyphosphooctonate aldolase; COG1544 Ribosome-associated protein Y (PSrp-1).
  
     0.628
EDP72193.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
  
   0.626
EDP72736.1
UDP-2,3-diacylglucosamine hydrolase; COG2908 Uncharacterized protein conserved in bacteria.
  
     0.616
EDP72556.1
Putative transmembrane protein.
       0.585
Your Current Organism:
Flavobacteriales bacterium ALC1
NCBI taxonomy Id: 391603
Other names: F. bacterium ALC-1, Flavobacteriales bacterium ALC-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.